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Emtricitabine/Tenofovir

nucleoside/nucleotide reverse transcriptase inhibitors, fixed-dose combination

Findings for this medication

Research about this medication, graded for how strongly each finding can be attributed to it. Nothing here describes your own levels.

Emtricitabine/tenofovir has almost no classical depletion machinery. Neither component is meaningfully metabolized by CYP enzymes (the label describes a low potential for CYP-mediated interactions), emtricitabine is mostly excreted unchanged, and tenofovir is cleared by glomerular filtration plus active tubular secretion [1][2]. No mineral chelation or acid-dependent absorption interaction is listed in the label text retrieved. The one real mechanism is renal: tenofovir disoproxil fumarate (TDF) can injure the proximal tubule, and the label names Fanconi syndrome ("renal tubular injury with severe hypophosphatemia") [1][2]. That is a renal loss pathway, so phosphate and potassium wasting are graded here as depletion with a mechanism, and they are bounded. Treatment-limiting tubulopathy occurred in 69 of 15,983 TDF-treated patients (0.4%) in a UK cohort [5], and in a comparative youth cohort the average effect was a small fall in tubular phosphate reabsorption (92.0% vs 93.3%) with unchanged serum phosphate [7].

nucleoside/nucleotide reverse transcriptase inhibitors, fixed-dose combination · ATC J05AR03 (WHO ATC/DDD Index [4]) · also sold as Truvada; many generics. Comparator: Descovy (emtricitabine/tenofovir alafenamide) · reviewed 2026-10-09. This describes research about the medication. It does not say anything about your own levels or health.

How to read the evidence grades

These colours describe how strongly a finding can be attributed to the medication in the research. They are not a severity score and they say nothing about your own health.

Grades describe how strongly a finding can be attributed to Emtricitabine/Tenofovir in the research — not how common it is, how serious it would be, and not anything about you personally.

Red — Severe
Two or more independent Tier A sources, this drug in the cohort, the nutrient directly measured, consistent direction, clinically meaningful magnitude, a named mechanism, no substantial contradicting Tier A evidence.
Orange — Moderate
At least one Tier A source with this drug in the cohort showing a real but bounded deficit: an exposure window, a subgroup, low frequency, or a functional rather than circulating deficit.
Yellow — Low
Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction.
Not graded — disclosed evidence gap
Nothing has been measured here, so this finding cannot be graded. That does not establish either safety or harm, and it is not the same as a White result.Source definition: Not gradeable under the rules above because nothing has been measured. Published as a documented gap, never as reassurance that there is no effect.

What the research found

Phosphate: renal tubular wasting, bounded to the TDF proximal tubulopathy subgroup

Orange — Moderate

Evidence: moderate

Direction: depletion (renal loss). Tenofovir disoproxil injures the proximal tubule in a minority of users and causes urinary phosphate loss with hypophosphatemia and osteomalacia; across all users the average shift is small and serum phosphate is usually unchanged.

Full detail and limits

What the grade means here: At least one Tier A source with this drug in the cohort showing a real but bounded deficit: an exposure window, a subgroup, low frequency, or a functional rather than circulating deficit. Orange, moderate

Limits on what this shows

  • At-risk subgroups: Of 60 tubulopathy cases, 90% were on a protease inhibitor-containing regimen and 30% on didanosine [5]; older age (OR 1.1 per year) [8]; higher mid-dose TDF concentration (0.143 vs 0.108 mg/L, p = 0.04) [6]; CrCl below 60 mL/min, nephrotoxic co-medication and high-dose or multiple NSAIDs (label) [1][2].

Regulatory status

Truvada label sec 5.3: Fanconi syndrome ("renal tubular injury with severe hypophosphatemia") reported with TDF; assess serum phosphorus in chronic kidney disease; persistent or worsening bone pain, pain in extremities or fractures may indicate proximal renal tubulopathy. Sec 5.5: osteomalacia from proximal renal tubulopathy; consider hypophosphatemia in at-risk patients with persistent bone or muscle symptoms [1][2]. The Descovy (TAF) label lists proximal renal tubulopathy and Fanconi syndrome as postmarketing events with TAF-containing products [3].

Population evidence

Hamzah 2017, UK CHIC cohort [5]: 15,983 patients on at least 4 weeks of TDF-containing ART; 69 (0.4%) developed treatment-limiting tubulopathy; 60 analysed (48 proximal renal tubulopathy, 12 acute tubular injury). Hypophosphatemia (below 1.98 mg/dL) in 41 of 55 measured (75%). Ezinga 2014, Nijmegen [6]: 161 patients on TDF for at least 1 year, cross-sectional; kidney tubular dysfunction in 17 (10.6%); phosphate fractional excretion above 20% with hypophosphatemia in 15 (9.3%), 12 of 17 (70.6%) with tubular dysfunction vs 3 of 144 (2.1%) without. Havens 2013, ATN 063 [7]: 118 youth on TDF vs 85 not; tubular reabsorption of phosphate 92.0% vs 93.3% (adjusted p = 0.011); serum phosphate 3.7 vs 3.6 mEq/L as printed (adjusted p = 0.71). Labarga 2009, Madrid [8]: 284 patients (154 TDF-containing ART, 49 other ART, 81 naive); significant tubular damage (at least 2 markers, one a Fanconi criterion including hyperphosphaturia) in 22%, 6% and 12%; TDF use independently predicted it (OR 21.6, 95% CI 4.1 to 113). Separate phosphate values were not in the abstract. Obiebi 2018, Port Harcourt [9]: prospective, 57 on TDF vs 47 not; urinary phosphate (units as printed, mg/dL) 13.6 vs 10.8 at week 16 (p = 0.009) and 18.9 vs 16.3 at week 24 (p = 0.007), baseline 10.6 vs 9.8 (p = 0.465).

Mechanism

Present (class C, renal wasting). Tenofovir is cleared by glomerular filtration plus active tubular secretion, so it concentrates in proximal tubular cells; the label names the result as renal tubular injury [1][2]. In Havens, higher plasma tenofovir tracked with higher vitamin D binding protein and higher serum calcium while higher intracellular tenofovir diphosphate tracked with lower FGF23, which the authors read as separate mechanisms for the parathyroid and phosphate effects [7]. The named uptake and efflux transporters were not in the retrieved label text and the transporter literature was not opened.

Cohort test

Tenofovir disoproxil was in every cohort above. The label-quoted PrEP trials gave the fixed combination. Hamzah, Ezinga, Havens and Obiebi describe TDF-containing regimens without stating how many also received emtricitabine, so the effect is attributed to the tenofovir component; emtricitabine is not implicated by any retrieved label text.

Red/orange hunt

Held at orange, not red: the direction is consistent across five human studies with direct tubular phosphate measures and a named mechanism, but the clinically meaningful deficit is confined to a rare subgroup (0.4% treatment-limiting in [5], about 9% with biochemical phosphate wasting in a TDF-only cross-sectional sample [6]) and three Tier A sources show no excess low serum phosphate in the wider treated population (see counter-evidence).

Counter-evidence held on record

Counter-evidence on record Cooper 2010, meta-analysis of 17 studies (9 randomized) comparing TDF with non-TDF regimens: creatinine clearance 3.92 mL/min lower (95% CI 2.13 to 5.70), acute renal failure risk difference 0.7% (0.2 to 1.2), and no evidence linking TDF to severe proteinuria, hypophosphatemia or fractures [10]. Label PrEP trials, grade 2 to 4 phosphorus below 2.0 mg/dL: 10% vs 8% placebo (iPrEx, n = 1251 vs 1248) and 9% vs 9% (Partners PrEP, n = 1579 vs 1584) [1]. Havens: serum phosphate did not differ between TDF and no-TDF groups [7]. Hamzah and Ezinga have no non-TDF comparator for the proportions given. Framing caution for the consumer surface This is a renal-loss syndrome of the drug in a minority of users, a prescriber and monitoring matter. It is not a signal that people taking emtricitabine/tenofovir should increase phosphate intake or take a supplement. Most users have no clinically relevant phosphate change.

Potassium: renal wasting confined to the rare TDF tubulopathy subgroup (3 of 44 measured cases)

Orange — Moderate

Evidence: moderate

Direction: depletion (renal loss). Hypokalemia occurs as part of TDF Fanconi-type tubulopathy; no evidence was found of potassium loss in the wider treated population.

Full detail and limits

What the grade means here: At least one Tier A source with this drug in the cohort showing a real but bounded deficit: an exposure window, a subgroup, low frequency, or a functional rather than circulating deficit. Orange, moderate

Limits on what this shows

  • At-risk subgroups: As for phosphate: boosted protease inhibitor regimens, didanosine, reduced kidney function, older age [5][8].

Regulatory status

Truvada label sec 6.2 (postmarketing) lists "hypokalemia" under Metabolism and Nutrition Disorders with no frequency, and states that the listed reactions, including hypokalemia, "may occur as a consequence of proximal renal tubulopathy" (re-read in the repair pass through the summarizing fetch tool) [1]. Study 934 and the PrEP laboratory tables in the label contain no potassium row [1]. Section 5.3 names Fanconi syndrome and hypophosphatemia [1][2].

Population evidence

Hamzah 2017 [5]: among 60 patients with treatment-limiting TDF tubulopathy, hypokalemia (potassium below 3.0 mEq/L) in 3 of 44 with a measurement (7%). The cohort was 15,983 TDF-treated patients, so this is a handful of cases in a very large exposed group. Park 2026 case report with literature review [15] (Tier B): in 95 published cases of tenofovir-associated Fanconi syndrome, hypokalemia was reported in 45%; publication bias toward severe cases is likely. The index case had a potassium nadir of 3.0 mmol/L. Mathew 2006 case report [14] (Tier B): a 38-year-old man on tenofovir, lamivudine and efavirenz with potassium 1.9 mEq/L, serum phosphorus 1.2 mg/dL and bicarbonate 19 mEq/L; urinalysis normal one year after discharge. Tenofovir-induced distal renal tubular acidosis case report, J R Coll Physicians Edinb 2022 [29] (Tier B, PubMed listing snippet only): recurrent hypokalaemic paralysis attributed to tenofovir; the abstract suggests monitoring urinalysis and serum potassium and reports improvement after potassium correction. Full text not opened. Pooled hepatitis B cross-sectional study, Gastroenterol Res Pract 2016 [28]: 92 patients on adefovir or tenofovir (alone or added to lamivudine) for more than 1 year; fractional excretion of potassium was calculated and "potassium losses with hypokalemia" was one of the criteria for tubular dysfunction; proximal tubular dysfunction in 24 of 92 (26.1%). Abstract only (OpenAlex reconstruction); no per-drug or per-criterion potassium counts are in the abstract, adefovir is a different nucleotide analogue, and emtricitabine is not part of the regimen, so it cannot serve as a second potassium cohort for this drug.

Mechanism

Present (class C). Proximal tubular injury with impaired reabsorption of electrolytes and bicarbonate, with downstream potassium loss; the same tubular injury as the phosphate entry [1][2][5].

Cohort test

TDF-containing ART in [5]; emtricitabine co-administration not stated. Case reports [14][15][29] involve tenofovir with lamivudine/efavirenz or TDF alone (emtricitabine not mentioned in [15] or in the snippet of [29]). [28] pools adefovir and tenofovir users and is not counted.

Red/orange hunt

Held at orange, not red. The label now supports the direction: postmarketing hypokalemia is named as a consequence of proximal renal tubulopathy [1], but with no frequency, so it is a Tier A statement of occurrence, not a measured effect size. Only one Tier A cohort reported measured potassium (3 of 44 low, no comparator) [5]. Second-cohort search in the repair pass: Ezinga 2014 full text read through a summarizing fetch tool, no potassium mention [6]; Obiebi 2018 and Cooper 2010 report no potassium [9][10]; the pooled hepatitis B cross-sectional study [28] used potassium loss as a criterion but its abstract gives no per-drug counts and its full text could not be opened (Hindawi, DOI and Wiley routes returned client errors); PubMed and Crossref listing queries for hypokalemia in tenofovir cohorts were 429-throttled after one useful PubMed listing. Would rise to red only with a second cohort reporting measured potassium in TDF users against a non-TDF comparator.

Counter-evidence held on record

Counter-evidence on record No Tier A source found a potassium difference between TDF-treated and untreated groups in an unselected population. Obiebi 2018 did not report potassium [9]; Ezinga 2014 did not report potassium [6]; Cooper 2010 reported no hypophosphatemia or severe tubular outcome overall [10]. The label lists hypokalemia only as a rare postmarketing event with no frequency [1]. Framing caution for the consumer surface Low potassium here is a symptom of a drug-induced kidney syndrome, not a dietary shortfall. A potassium supplement on its own would not treat the cause and can be hazardous if kidney function is reduced; this is a prescriber decision.

Bicarbonate: renal wasting marker of the tubulopathy (outcome entry)

Yellow — Low

Evidence: low

Direction: depletion (renal loss), capped at yellow. Low serum bicarbonate and metabolic acidosis are clinical manifestations of the same proximal tubulopathy, not a nutrient shortfall.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

Not named in the retrieved Truvada label text; Fanconi syndrome (renal tubular injury) is named [1][2].

Population evidence

Hamzah 2017 [5]: metabolic acidosis (bicarbonate below 19 mEq/L) in 7 of 22 with a measurement (32%) among 60 tubulopathy cases from 15,983 TDF-treated patients. Park 2026 [15] (Tier B): non-anion-gap metabolic acidosis in 56% of 95 reported cases. Mathew 2006 [14] (Tier B): bicarbonate 19 mEq/L at presentation, 25 mEq/L two weeks later.

Mechanism

Present (class C): proximal tubular bicarbonate reabsorption failure. Obiebi 2018 did not measure urinary bicarbonate [9].

Cohort test

TDF in the cohort [5]; emtricitabine co-administration not stated.

Why yellow

Hard Rule 2: acidosis is a clinical outcome and bicarbonate is a buffer produced by the body, not an intake-dependent nutrient. Only one Tier A cohort measured it, in 22 cases.

Counter-evidence held on record

Framing caution for the consumer surface Not a deficiency of anything the diet supplies. It is a monitoring signal for kidney tubular injury.

Uric acid: renal urate wasting marker of the tubulopathy

Yellow — Low

Evidence: low

Direction: depletion of serum urate through renal loss, capped at yellow. A marker of proximal tubular dysfunction with no nutrient intake implication.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

Not named in the retrieved label text [1][2].

Population evidence

Ezinga 2014 [6]: urate fractional excretion above 10% with low plasma urate in 7 of 161 TDF-treated patients (4.3%), 5 of 17 (29.4%) with tubular dysfunction vs 2 of 144 (1.4%) without. Labarga 2009 [8] counted hyperuricosuria among its tubular markers.

Mechanism

Present (class C): proximal tubular urate handling lost in tubular injury.

Cohort test

TDF-containing ART in both cohorts; emtricitabine not separated.

Why yellow

Urate is a metabolite, not a nutrient, low serum urate is not a deficiency state, and one Tier A source has direct plasma and fractional-excretion data.

Counter-evidence held on record

Counter-evidence on record Obiebi 2018: urine uric acid at 24 weeks 289 vs 251 in TDF vs non-TDF, p = 0.260 (not significant) [9]. Framing caution for the consumer surface A marker for the clinician, not a deficiency claim.

Vitamin D axis: higher PTH and 1,25(OH)2D, with 25-hydroxyvitamin D unchanged

Yellow — Low

Evidence: low

Direction: neutral to reverse for 25-hydroxyvitamin D status; hormone-axis activation (higher PTH and 1,25-dihydroxyvitamin D) with TDF. The label states these rises; no fall in 25-hydroxyvitamin D was shown.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

Truvada label sec 5.5: serum parathyroid hormone and 1,25-vitamin D levels were higher in subjects receiving TDF; the effect of calcium and vitamin D supplementation "was not studied" but "may be beneficial" [1][2].

Population evidence

Havens 2013, ATN 063 [7]: 118 youth on TDF vs 85 not; PTH 47.7 vs 31.2 pg/mL (adjusted p less than 0.001); 1,25-dihydroxyvitamin D 113.7 vs 108.5 pmol/L (adjusted p = 0.016); 25-hydroxyvitamin D 20.8 vs 21.7 ng/mL (p = 0.39); serum calcium 9.4 vs 9.5 mg/dL (adjusted p = 0.19). Within the TDF group, the highest quintile of plasma tenofovir had higher vitamin D binding protein and lower free 1,25-dihydroxyvitamin D; the authors propose a "functional vitamin D deficiency" as the cause of the PTH rise. Overton 2015, ACTG A5280, Ann Intern Med [24] (second Tier A source; abstract read from an OpenAlex record): 165 treatment-naive adults randomized (79 vitamin D3 plus calcium, 86 placebo) while starting efavirenz/emtricitabine/tenofovir disoproxil fumarate; in the placebo arm median 25-hydroxyvitamin D changed by +1.7 nmol/L (IQR -13.2 to 10.7) over 48 weeks, i.e. no fall, while the supplemented arm rose by 61.2 nmol/L. PTH was not in the abstract and the full text could not be opened (ACP journal page returned a client error; PubMed record served a bot challenge).

Mechanism

Present, partly. Phosphate wasting raises 1,25-dihydroxyvitamin D and PTH; the free-calcitriol hypothesis is the authors' proposal from a quintile comparison, not a tested mechanism. A rise in 1,25-dihydroxyvitamin D runs opposite to a vitamin D deficiency state.

Cohort test

TDF-containing regimens (emtricitabine share not reported; efavirenz in 53% of the TDF group vs 25% of the no-TDF group) [7]. Label statement applies to the combination product.

Why yellow

The measured nutrient (25-hydroxyvitamin D) did not move, so no deficiency is shown; PTH and 1,25-dihydroxyvitamin D are hormones (Hard Rule 2). The functional-deficiency idea is testable (free calcitriol, PTH after vitamin D3) but was not confirmed in the sources opened. A second Tier A source [24] also shows no fall in 25-hydroxyvitamin D after starting a tenofovir/emtricitabine regimen (placebo arm +1.7 nmol/L), so the nutrient itself was measured in two cohorts without a decline.

Counter-evidence held on record

Counter-evidence on record 25-hydroxyvitamin D was not lower in TDF users [7] and did not fall over 48 weeks in the placebo arm of a randomized trial of efavirenz/emtricitabine/TDF initiation [24]. [7] is cross-sectional, adjusted, and the TDF group differed in efavirenz exposure; in [24] efavirenz was part of every participant's regimen, so efavirenz cannot be separated from the combination. Framing caution for the consumer surface Do not read this as vitamin D deficiency caused by the drug. The label text retrieved says vitamin D and calcium supplementation was not studied; a randomized trial since then reported less bone loss with supplementation during efavirenz/emtricitabine/TDF initiation [24], which is a bone-outcome result and not a dosing recommendation here. Any decision belongs with a prescriber.

Calcium and bone mineral: BMD loss is an outcome; serum calcium was not lower

Yellow — Low

Evidence: low

Direction: outcome. Small BMD decreases occur with TDF and are smaller or absent with TAF. This entry names the outcome; it is not a calcium or vitamin D deficiency finding.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

Truvada label sec 5.5: TDF was associated with slightly greater BMD decreases and higher bone turnover markers than comparators; iPrEx BMD substudy (n = 503) mean changes -0.4% to -1.0% across sites; 13% vs 6% lost at least 5% at the spine; fractures 1.7% vs 1.4% (iPrEx) and 0.8% vs 0.6% (Partners PrEP) [1][2]. Descovy label, DISCOVER: lumbar spine +0.5% (TAF) vs -1.1% (TDF), total hip +0.2% vs -1.0% [3].

Population evidence

iPrEx BMD substudy [11]: 498 participants (247 emtricitabine/TDF, 251 placebo); week 24 net spine change -0.91% (95% CI -1.44 to -0.38, p = 0.001), hip -0.61% (-0.96 to -0.27, p = 0.001); later intervals not significant; spine tended to recover after stopping; no fracture difference (p = 0.62). ASSERT [12]: 385 treatment-naive adults, tenofovir-emtricitabine vs abacavir-lamivudine, both with efavirenz; week 48 hip -3.6% vs -1.9% (p less than 0.001), spine -2.4% vs -1.6% (p = 0.036); loss of 6% or more at the hip in 13% vs 3% and at the spine in 15% vs 5%; bone turnover markers rose more with tenofovir-emtricitabine. Overton 2015, ACTG A5280 [24]: in 165 treatment-naive adults starting efavirenz/emtricitabine/TDF, total hip BMD change at 48 weeks was -3.22% (IQR -5.56 to -0.88) on placebo vs -1.36% (IQR -3.43 to 0.50) with vitamin D3 plus calcium (P = 0.004); lumbar spine similar; no hypercalcemia. This shows bone loss on the combination regimen, not that it was caused by a calcium or vitamin D shortfall; all participants also took efavirenz and had untreated HIV at baseline. Sax 2015 [13]: 1,733 adults on elvitegravir/cobicistat/emtricitabine plus TDF (867) or TAF (866); spine -2.86% vs -1.30%, hip -2.95% vs -0.66% (all p less than 0.0001).

Mechanism

Present: phosphate wasting with raised PTH and 1,25-dihydroxyvitamin D and osteomalacia from proximal tubulopathy (label) [1][2]. The raised PTH in [7] fits bone mineral mobilization, but serum calcium was unchanged [7].

Cohort test

Emtricitabine/TDF was in iPrEx [11], ASSERT [12] and the TDF arm of [13]. ASSERT's comparator is another drug (abacavir-lamivudine), so it does not test the combination against non-use; both arms lost bone.

Why yellow

Hard Rule 2: BMD and fracture are outcomes. No calcium or vitamin D deficiency was shown (serum calcium and 25-hydroxyvitamin D unchanged in [7]). Fracture rates were not significantly different from placebo in the PrEP trials [1][11].

Counter-evidence held on record

Counter-evidence on record Cooper 2010 found no association of TDF with fractures [10]. Efavirenz and HIV-related factors are competing explanations in treatment trials; in ASSERT both arms lost bone [12]. In iPrEx the loss occurred mainly in the first 24 weeks and then plateaued [11]. Framing caution for the consumer surface Bone density change is a drug effect on bone and kidney handling of phosphate, not proof of low calcium or vitamin D intake. The label notes supplementation was not studied; nothing here recommends a supplement.

Carnitine (acetyl-carnitine): class extrapolation from didanosine, zalcitabine and stavudine

Yellow — Low

Evidence: low

Direction: depletion (acetyl-carnitine). CLASS EXTRAPOLATION. A 1997 study found low acetyl-carnitine in HIV patients with neuropathy on older nucleoside analogues; neither emtricitabine nor tenofovir was in that cohort.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

No carnitine statement in the retrieved Truvada label text [1][2].

Population evidence

Famularo 1997 [22]: non-randomized cross-sectional study; 12 HIV-positive patients with neuropathy on didanosine, zalcitabine or stavudine had significantly lower serum acetyl-carnitine than controls (didanosine n = 10 and zidovudine n = 11 without neuropathy, 10 HIV-negative neuropathy patients, 13 healthy); total carnitine did not differ. Figures reconstructed from an OpenAlex abstract index, so group sizes may be approximate.

Cohort test

FAILED for this drug: emtricitabine and tenofovir were not in the cohort (study predates both as HIV drugs). Tier C, capped at yellow.

Mechanism

Plausible but weak for this drug. The proposed route is nucleoside-analogue interference with mitochondrial DNA synthesis. The Truvada label describes both active metabolites only as weak inhibitors of mitochondrial polymerase gamma [2].

Why yellow

A real class-member study exists and the mechanism is at least plausible, so ungraded is not allowed. Search record: one Crossref bibliographic query on carnitine and nucleoside analogues returned older antiretroviral and pediatric studies; OpenAlex lookups of two of them returned no abstract. No study measuring carnitine in emtricitabine or tenofovir users was found.

Counter-evidence held on record

Counter-evidence on record No counter-evidence found in this drug. Crossref lookups for carnitine with nucleoside analogues returned older antiretroviral and children's studies; the children's study (2003) and a 2004 review had no retrievable abstract or drug list and are not used [22]. Framing caution for the consumer surface Not a finding that emtricitabine/tenofovir lowers carnitine. Do not suggest carnitine supplementation from this entry.

The five body-system areas

Each finding is counted once, in a single area. Where a study is mentioned in a second area it is context only.

Mitochondrial Burden

Each finding below is counted once, in this area only.

Mitochondrial burden: labeled weak polymerase gamma inhibition and lactic acidosis warning, mixed human surrogates

Yellow — Low

Evidence: low

Direction: mixed, and a drug-toxicity pathway rather than a nutrient deficiency. Label text warns of lactic acidosis with nucleoside analogues; small human PBMC studies disagree on direction.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

Sec 12.4: both active metabolites are weak inhibitors of mitochondrial DNA polymerase gamma. Sec 5.6: lactic acidosis and severe hepatomegaly with steatosis, including fatal cases, reported with nucleoside analogues including emtricitabine and TDF; suspend treatment if suspected [1][2].

Population evidence

Groener 2011 [16]: 18 HIV-uninfected adults on a 4-week post-exposure regimen of emtricitabine/tenofovir plus lopinavir/ritonavir; PBMC mitochondrial transmembrane potential fell (linear p = 0.0015, quadratic p = 0.0039) and normalized weeks after stopping; apoptosis unchanged (p = 0.42). The regimen includes ritonavir-boosted lopinavir, so the effect cannot be assigned to the combination. Bano 2020 [17]: 23 analysed HIV-uninfected adults on 28-day PEP, protease inhibitor plus tenofovir/emtricitabine (n = 14) vs protease inhibitor plus zidovudine/lamivudine (n = 9); PBMC mtDNA/nDNA ratio went 136.5 to 177.3 on tenofovir/emtricitabine (not significant within group); between-arm change +43.2% vs -17.9% (p less than 0.05). No mtDNA depletion with tenofovir/emtricitabine. Bowman 2020 [18] (in vitro, Tier B): human PBMC exposed to 1 micromol/L emtricitabine or TDF separately for 24 hours showed lower maximal oxygen consumption and spare respiratory capacity (p less than 0.05) and reduced mitochondrial mass; the combination was not tested.

Mechanism

Present, weak. Nucleoside analogue triphosphates can inhibit mitochondrial polymerase gamma; the label calls both inhibitions weak [2]. Herlitz 2010 [23] (Tier B, retrospective biopsy series; abstract read from the PubMed record in the repair pass): 13 patients with tenofovir nephrotoxicity (mean tenofovir exposure 19.6 months); electron microscopy showed "mitochondrial enlargement, depletion, and dysmorphic changes" in proximal tubular cells and light microscopy eosinophilic inclusions described as giant mitochondria; glycosuria in 7 (5 normoglycemic); most recovered after stopping the drug. The abstract does not report phosphate or potassium and does not list concomitant drugs, so emtricitabine involvement is unknown.

Cohort test

Emtricitabine/tenofovir was in [16] (with lopinavir/ritonavir) and [17] (with a protease inhibitor); not isolated from the other drugs in either. [18] tested components separately in vitro. Tenofovir was the exposure in [23] with emtricitabine not stated; its findings are in kidney tissue of a toxicity case series.

Why yellow

Mechanistic plausibility plus label warning, with conflicting human surrogates (membrane potential down in [16], mtDNA up in [17]) and ritonavir confounding. Lactic acidosis is a toxicity and is not filed as a nutrient deficiency (Hard Rule 2).

Counter-evidence held on record

Counter-evidence on record mtDNA did not fall on tenofovir/emtricitabine [17]. Both PEP studies are small, short (4 weeks) and in uninfected volunteers on boosted protease inhibitors. The biopsy findings [23] come from patients already selected for tenofovir nephrotoxicity (a rare subgroup) and do not show a systemic mitochondrial deficit or a nutrient shortfall. Framing caution for the consumer surface A drug-safety signal for clinicians (label: suspend if lactic acidosis is suspected). Not a deficiency, and not a prompt to take mitochondrial supplements.

Oxidative Stress

Each finding below is counted once, in this area only.

Oxidative stress: higher ROS in human monocytes exposed to emtricitabine or TDF (Tier B)

Yellow — Low

Evidence: low

Direction: excess oxidant burden from the drug, not antioxidant depletion. One in vitro and ex vivo study; no human antioxidant marker found.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

No oxidative stress statement in the retrieved label text [1][2].

Population evidence

Bowman 2020 [18]: whole blood from donors exposed ex vivo for 3 hours to 1 micromol/L emtricitabine or TDF (tested separately) had significantly increased intracellular ROS in monocyte subsets (CellROX; no numeric values in the text read). A paired human cohort of people starting PrEP (n = 27 plasma, n = 15 lipidomics) did not measure ROS or mitochondrial function in vivo.

Mechanism

Plausible, linked to the mitochondrial findings in the same experiments (see Overlap map).

Cohort test

Emtricitabine and TDF were each in the experiments; the fixed combination was not.

Why yellow

Tier B only, single source, concentrations 1 micromol/L, no clinical oxidative marker (malondialdehyde, glutathione, SOD) in users found. The Crossref search for clinical oxidative stress markers in tenofovir users returned 429 and was not completed, so this is partly tooling-limited.

Counter-evidence held on record

Framing caution for the consumer surface Not evidence of antioxidant depletion or a reason to take antioxidants.

Copper and Iron Balance

Copper and iron are assessed separately. Nothing here is counted twice.

Copper

Not graded — disclosed evidence gap

See study details

No copper measurement or copper claim was found for emtricitabine or tenofovir.

Full detail and limits

What the grade means here: Nothing has been measured here, so this finding cannot be graded. That does not establish either safety or harm, and it is not the same as a White result. Ungraded

Limits on what this shows

  • Why no grade: Both conditions of the dual test hold: no Tier B or C evidence for copper was found for this drug or for nucleoside analogues, and no circulating claim was found to rebut as white. This is a disclosed evidence gap, not a finding of safety.

Channels tried

(1) Truvada label text via DailyMed and Drugs.com (both through summarizing fetch tools): no copper statement in the sections read. (2) PubChem tenofovir compound page, drug and medication section: no copper or other nutrient content in the summary returned. (3) PubMed listing 'tenofovir serum copper': one record, an unrelated fluorescent sensor paper (PMID 40594991), no human data. (4) PubMed boolean query for tenofovir or emtricitabine with copper or ceruloplasmin: returned an invalid-form page with zero records. (5) Plain PubMed queries 'emtricitabine tenofovir ceruloplasmin' and 'tenofovir ceruloplasmin': one client error and one 429. (6) Crossref query for serum copper, zinc and selenium in HIV on tenofovir: 429. (7) WebSearch: budget exhausted before a copper query could be run.

Repair-pass channels

(8) Crossref bibliographic query "tenofovir serum copper zinc selenium HIV" (succeeded): ten records, all HIV-wide or non-HIV trace-element studies (for example serum zinc, copper and selenium versus CD4 count in HIV, and copper and zinc in HIV diarrhea in Ethiopia); none names tenofovir or emtricitabine, none was opened, and none is used because the cohort test cannot be met and HIV disease is the exposure. (9) PubMed listing for copper, ceruloplasmin or ferritin with tenofovir: 429. (10) WebSearch: shared budget exhausted for the whole turn. (11) Label sections 6.1, 6.2 and the drug-interaction tables read again: no copper statement.

Gap type

Probable genuine literature gap with a residual tooling limit: every query that returned records returned nothing specific to tenofovir or emtricitabine, but PubMed and WebSearch (the two best channels) were throttled or exhausted, so the gap is not proven. Re-check when access is restored.

Iron

Not graded — disclosed evidence gap

See study details

No iron measurement (ferritin, transferrin saturation, absorption) was found for emtricitabine or tenofovir.

Full detail and limits

What the grade means here: Nothing has been measured here, so this finding cannot be graded. That does not establish either safety or harm, and it is not the same as a White result. Ungraded

Limits on what this shows

  • Why no grade: Dual test met: no Tier B or C evidence on iron status for this drug, and no circulating iron claim found to rebut. A hemoglobin result exists in the label (see Oxygen delivery) but hemoglobin is not an iron measurement.

Channels tried

(1) Truvada label via DailyMed and Drugs.com summarizers: no iron statement; the PrEP laboratory table contains hemoglobin only. (2) PubMed listing 'tenofovir iron deficiency anemia ferritin': client error. (3) PubMed listing 'tenofovir emtricitabine anemia hemoglobin': 429 on repeated tries at spaced intervals. (4) Crossref query 'tenofovir emtricitabine anemia hemoglobin iron deficiency serum ferritin': 429 on two attempts. (5) WebSearch: budget exhausted. (6) Class lead considered and not used: zidovudine anemia is specific to the comparator drug and was not borrowed.

Repair-pass channels

(7) Crossref bibliographic query "tenofovir serum ferritin iron status antiretroviral anemia" (succeeded): ten records, all general iron deficiency or ferritin methodology papers with no tenofovir or emtricitabine cohort; none opened or used. (8) PubMed listing "emtricitabine tenofovir ferritin": 429. (9) Truvada label re-read (Study 934 and PrEP laboratory tables): hemoglobin rows only, which are not iron measures. (10) WebSearch: budget exhausted.

Gap type

Probable genuine literature gap with a residual tooling limit: the one query that returned records found nothing for this drug, while PubMed and WebSearch were throttled or exhausted. Re-check when access is restored.

Gut Microbiome Risk

Each finding below is counted once, in this area only.

Gut microbiome risk: rectal microbiota shifts in PrEP users, direction inconsistent, confounded

Yellow — Low

Evidence: low

Direction: compositional change without a consistent direction or a diversity loss. Two cohorts with emtricitabine/TDF in them disagree on Streptococcus.

Full detail, limits and 1 references

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

No microbiome statement in the retrieved label text [1][2].

Population evidence

Dubé 2018, Scientific Reports [19]: paired pre/post in 8 adherent men on emtricitabine/TDF PrEP for 48 to 72 weeks; Streptococcus fell from 12.0% to 1.2% (permutation p = 0.036) and Erysipelotrichaceae rose from 0.79% to 3.3% (p = 0.028); Shannon index 4.22 to 4.95 (p = 0.15), no global shift; no comparator group; douching by 6 of 8. Fulcher 2019, Open Forum Infectious Diseases [20]: 74 HIV-negative men (37 on emtricitabine/TDF PrEP, 37 matched off PrEP, propensity matched); PrEP use associated with more Streptococcus (adjusted p =.015), more Mitsuokella and Fusobacterium, fewer Escherichia/Shigella; Fusobacterium rose with higher tenofovir exposure (hair levels in 15). Abstract only (reconstructed OpenAlex abstract). Perler 2021, AIDS and Behavior [27] (cross-sectional; abstract page opened in the repair pass, Methods and Results paywalled): 27 men, 14 on PrEP for an average of 171 weeks vs 13 not on PrEP; self-collected rectal swabs, 16S rRNA sequencing; beta diversity differed (Bray-Curtis p = 0.05, unweighted UniFrac p = 0.049); Finegoldia lower, Catenibacterium and Prevotella higher in PrEP users, no p-values or effect sizes given for genera. The abstract says only "tenofovir-based regimens" and its keywords list both TDF/FTC and TAF/FTC, so the regimen is unconfirmed. Alpha diversity unchanged and no change in Streptococcaceae or Erysipelotrichaceae according to the mini-review [21].

Mechanism

Absent as a named mechanism. The studies report associations; the authors discuss rectal drug exposure and sexual practices as alternatives.

Cohort test

Emtricitabine/TDF was the studied PrEP regimen in [19] and [20]; for [27] the regimen is unconfirmed (tenofovir-based; TDF/FTC and TAF/FTC both in the keywords), so [27] is supportive context only. [21] is a review.

Why yellow

Tier A-type cohorts exist but are tiny or cross-sectional, differ on the direction of the one repeated taxon (Streptococcus down in [19], up in [20], unchanged in [27] per the review [21]), and show no alpha diversity loss or clinical consequence. No evidence of depletion or harm; flagged as a context entry.

Counter-evidence held on record

Counter-evidence on record Sexual behavior is a confounder: in Perler the PrEP group had more receptive anal sex partners and this correlated with Prevotella (per the review [21]); Dubé had no comparator; the review states the evidence is scarce [19][20][21]. Alpha diversity did not change in the three cohorts for which it is reported ([19], [20], [27] via [21]). Framing caution for the consumer surface No specific bacteria or health outcome is attributed to the drug by this evidence. Not a prompt to take a probiotic.

Oxygen and ATP Output

Oxygen delivery and ATP production are assessed separately. Nothing here is counted twice.

ATP production: reduced maximal respiratory capacity in vitro, ATP-linked respiration unchanged

Yellow — Low

Evidence: low

Direction: mixed. Human PBMC showed lower maximal respiration and spare capacity after emtricitabine or TDF exposure, but ATP-linked respiration did not differ. No in vivo ATP measure found.

Full detail and limits

What the grade means here: Mechanistic plausibility only (Tier B), or class extrapolation (Tier C) with no drug-specific human status data; also used for context flags and interactions running the other direction. Yellow, low

Regulatory status

No ATP or energy statement in the retrieved label text [1][2].

Population evidence

Bowman 2020 [18]: PBMC at 1 micromol/L for 24 hours, FCCP-induced maximal oxygen consumption and spare respiratory capacity decreased significantly (p less than 0.05) for both emtricitabine and TDF; basal respiration, proton leak and ATP-linked respiration did not differ significantly. Sample size inconsistent in the paper (n = 6 in the figure legend, n = 7 in Methods).

Mechanism

Plausible through the mitochondrial pathway above; ATP output itself was not shown to fall.

Cohort test

Components tested separately in vitro; no human ATP data for the combination.

Why yellow

Tier B mechanistic only; shares its source with Mitochondrial burden and Oxidative stress. Kept as its own entry per the protocol.

Counter-evidence held on record

Framing caution for the consumer surface A reduction in reserve capacity in cultured cells is not a measured energy deficit in people.

Oxygen delivery/utilization

Not graded — disclosed evidence gap

See study details

No effect on hemoglobin, red-cell mass or oxygen delivery was found for emtricitabine/tenofovir.

Full detail, limits and 1 references

What the grade means here: Nothing has been measured here, so this finding cannot be graded. That does not establish either safety or harm, and it is not the same as a White result. Ungraded

Limits on what this shows

  • Why no grade: Dual test met: no Tier B or C evidence of reduced hemoglobin or oxygen delivery was found, and no circulating claim was found to rebut. The label PrEP laboratory table is a Tier A null for one hematology threshold, not a finding of safety.
  • Label null: Grade 2 to 4 laboratory abnormalities, hemoglobin below 9.4 (units as printed in the label table): 1% on emtricitabine/TDF vs 2% on placebo in iPrEx [2]. Study 934 (treatment-naive adults, weeks 0 to 144, label Table 4, re-read in the repair pass): hemoglobin below 8.0 (printed as mg/dL) in 0% of 257 on emtricitabine plus TDF plus efavirenz vs 4% of 254 on zidovudine/lamivudine plus efavirenz; neutrophils below 750/mm3 3% vs 5%; creatine kinase 9% vs 7% [1]. The comparator is an active drug known for anemia, so this shows no excess hemoglobin fall against it and does not test the combination against non-use; the iPrEx figure is the placebo-controlled comparison. The label also states anemia in 7% of 116 children in an uncontrolled pediatric emtricitabine trial, with no comparator and mixed regimens, which cannot be attributed to the drug [1]. Zidovudine-related anemia belongs to the comparator zidovudine/lamivudine, not this drug, and is not borrowed.

Channels tried

(1) Truvada label (DailyMed and Drugs.com summarizers): hemoglobin threshold in the iPrEx laboratory table, 1% vs 2%; no oxygen-delivery, hemolysis or methemoglobin statement. (2) PubMed listing for tenofovir emtricitabine anemia hemoglobin: 429. (3) Crossref bibliographic query for anemia and hemoglobin: 429. (4) OpenAlex single-record lookup for the Study 934 treatment trial (DOIs tried 10.1056/NEJMoa055282 and 10.1056/NEJMoa051991): client error, so its anemia data were not read. (5) WebSearch: budget exhausted.

Repair-pass channels

(6) Study 934 label table opened via DailyMed (see Label null above). (7) Gallant 2006 NEJM abstract (OpenAlex, PMID 16421366) [25]: 517 randomized, 84% vs 73% HIV RNA below 400 at week 48, adverse-event discontinuation 4% vs 9%; no hemoglobin or anemia figure in the abstract; the PubMed record served a bot challenge and the full text was not opened. (8) Arribas 2008 144-week report (JAIDS) abstract (OpenAlex) [26]: no anemia or hemoglobin figure in the abstract, no renal discontinuations. (9) Crossref query on tenofovir, emtricitabine, PrEP, hemoglobin and anemia: ten records, none a hematology analysis. (10) PubMed listings: 429. (11) WebSearch: budget exhausted.

Gap type

Measured Tier A nulls exist (label tables, iPrEx placebo-controlled and Study 934 active-comparator), no Tier B or C evidence of reduced oxygen delivery was found, and no circulating claim was found. Residual tooling limit: the full-text hematology tables of Study 934 and any methemoglobin or hemolysis literature were not reached. This stays ungraded because a null is not a graded finding, not because the drug is shown safe.

Claims checked and not supported

These circulate online for this medication. They are listed here only so they can be answered, never as findings, and they are not graded.

A claim with no supporting evidence is not necessarily disproven. Where evidence actually argues against a claim, that is stated below.

  • Phosphate depletion in all users (routine hypophosphatemia)

    Where it comes from: Generalization of the label's Fanconi warning to every person taking the combination. The consumer-page version was not traced (WebSearch budget exhausted).

    Why it fails: Grade 2 to 4 phosphorus below 2.0 mg/dL was 10% vs 8% placebo (iPrEx) and 9% vs 9% (Partners PrEP) [1]; a meta-analysis of 17 studies found no association of TDF with hypophosphatemia [10]; serum phosphate did not differ in a youth cohort [7]. The real signal is the rare tubulopathy subgroup, graded orange.

  • Vitamin D (25-hydroxyvitamin D) deficiency caused by tenofovir

    Where it comes from: Reading of the label's higher PTH and 1,25-dihydroxyvitamin D statement and of the authors' functional vitamin D deficiency hypothesis [7]. Consumer origin not traced.

    Why it fails: Measured 25-hydroxyvitamin D did not differ (20.8 vs 21.7 ng/mL, p = 0.39) and 1,25-dihydroxyvitamin D was higher, the opposite of a deficiency state [7]; in the placebo arm of a randomized efavirenz/emtricitabine/TDF initiation trial the median change was +1.7 nmol/L over 48 weeks [24]. The PTH and 1,25-dihydroxyvitamin D rise is graded as a hormone-axis finding under Vitamin D axis.

  • Calcium depletion or hypocalcemia

    Where it comes from: Inference from bone mineral density loss. Consumer origin not traced.

    Why it fails: Serum calcium 9.4 vs 9.5 mg/dL, adjusted p = 0.19 [7]. Bone mineral density loss is an outcome (Hard Rule 2) and is entered separately.

  • Lactic acidosis as a vitamin, carnitine or CoQ10 deficiency

    Where it comes from: Nutrient-deficiency framing of the label's lactic acidosis warning (sec 5.6 [2]). Consumer origin not traced.

    Why it fails: The label treats it as a drug toxicity with the instruction to suspend treatment; no nutrient was measured in any source for this drug. Hard Rule 2.

  • Emtricitabine as the cause of the kidney and bone effects

    Where it comes from: Treating the fixed-dose product as one unit.

    Why it fails: The label attributes Fanconi syndrome and the bone and turnover findings to TDF [1][2]. Replacing TDF with TAF while keeping emtricitabine improved bone and kidney measures: DISCOVER spine +0.5% vs -1.1%, hip +0.2% vs -1.0%, eGFR +1.8 vs -2.3 mL/min [3]; spine -1.30% vs -2.86% in [13].

How the body handles this medication

Metabolism and enzymes
Emtricitabine is not significantly metabolized by liver enzymes (about 13% of a dose is recovered as a sulfoxide and a glucuronide). The label describes a low potential for CYP-mediated interactions for both components; no CYP inhibition or induction is named in the text retrieved.[1][2] Truvada label sec 12.3, via summarizing fetch tool
Elimination
About 86% of emtricitabine is recovered in urine. About 70 to 80% of an intravenous tenofovir dose is recovered unchanged in urine. Both are cleared by glomerular filtration plus active tubular secretion (renal clearance 213 mL/min for emtricitabine, 243 mL/min for tenofovir). Half-lives are about 10 and 17 hours.[1][2] sec 12.3
Absorption and transporters
Oral bioavailability is 92% for emtricitabine and 25% (fasted) for tenofovir from the TDF prodrug. TDF is a substrate of P-glycoprotein and breast cancer resistance protein; inhibitors may raise absorption. The renal uptake and efflux transporter names were not in the label text retrieved.[1][2] sec 12.3
Food interaction
A meal delayed tenofovir peak by about 0.75 hour and raised tenofovir AUC by about 35% and Cmax by about 15%; emtricitabine exposure was unchanged. This is a food-on-drug timing effect. No mineral or antacid chelation interaction is listed in the text retrieved.[2] sec 12.3
Renal tubular handling and impairment
Fanconi syndrome and acute renal failure are labeled with TDF. Exposure to both drugs rises when CrCl is below 50 mL/min; dosing interval is adjusted at CrCl 30 to 49, treatment is not recommended below 30 or on dialysis, and PrEP use is not recommended below 60 mL/min. Drugs eliminated by tubular secretion (acyclovir, cidofovir, ganciclovir, valacyclovir, aminoglycosides, high-dose or multiple NSAIDs) and boosted protease inhibitors can raise tenofovir exposure.[1][2] sec 5.3, 7, 12.3
Mitochondrial polymerase statement
Label sec 12.4: emtricitabine triphosphate is "a weak inhibitor" of mammalian DNA polymerases alpha, beta, epsilon and mitochondrial DNA polymerase gamma; tenofovir diphosphate is "a weak inhibitor" of polymerases alpha, beta and mitochondrial polymerase gamma. Sec 5.6 warns of lactic acidosis and severe hepatomegaly with steatosis, including fatal cases, with nucleoside analogues including both components.[2] sec 12.4, 5.6

What the research says is worth watching

General information from the medication label and the studies above. It is not personal medical advice, and any change belongs with your prescriber.

  • Labs / kidney

    Kidney function and urinalysis

    Label sec 5.3: assess serum creatinine, estimated creatinine clearance, urine glucose and urine protein before and during use; add serum phosphorus in chronic kidney disease [1][2]. Dose adjustment at CrCl 30 to 49 mL/min; not recommended below 30 or on dialysis; PrEP not recommended below 60 mL/min [2]. Glycosuria with normal blood glucose and proteinuria were the commonest accompaniments of tubulopathy (80% and 100% of measured cases) [5].

  • Labs / symptoms

    Phosphate, potassium, bicarbonate

    Worth checking serum phosphorus, potassium and bicarbonate if there is persistent bone or muscle pain, weakness, fracture or an abnormal urinalysis; fractional phosphate excretion above 20% was the tubulopathy criterion in [6]. Raised alkaline phosphatase occurred in 56% of tubulopathy cases [5]. These are monitoring prompts for a drug-induced kidney syndrome, not a finding that intake is low.

  • Imaging / bone

    Bone density in higher-risk users

    Label: persistent bone pain, extremity pain or fractures can reflect proximal tubulopathy and osteomalacia [1][2]. BMD loss is small on average in PrEP users (about 1% in the first 24 weeks) and recovered in part after stopping [11]; DISCOVER showed bone density gains on TAF [3]. Children and adolescents have specific label data [1]. Whether a switch to TAF suits a person with kidney or bone risk is a prescriber decision.

  • Interactions

    Drugs that raise tenofovir

    Drugs eliminated by tubular secretion, high-dose or multiple NSAIDs, aminoglycosides and several antivirals can raise exposure; ritonavir- or cobicistat-boosted protease inhibitors and some hepatitis C regimens raise tenofovir [2]. In the UK cohort 90% of tubulopathy cases were on a protease inhibitor regimen [5].

  • Safety

    Lactic acidosis and liver

    Label sec 5.6: suspend treatment if clinical or laboratory findings suggest lactic acidosis or marked hepatotoxicity [1][2]. The boxed warning also covers severe hepatitis B flare after stopping in HBV-infected people and HIV testing for PrEP [2]. This is drug toxicity and is not treated as a nutrient problem.

  • Timing

    Food and supplement timing

    A meal raised tenofovir AUC by about 35% [2]; the label text retrieved lists no mineral, antacid or vitamin separation interval. Label sec 5.5 says the effect of calcium and vitamin D supplementation was not studied [1]. No supplement dose is recommended or appears in this dossier.

  • Re-check list

    Items to revisit when access improves

    Copper and iron searches (PubMed and web search throttled); Study 934 full-text hematology; a second Tier A cohort with measured potassium and a non-TDF comparator; PTH data from Overton 2015 [24] and from ASSERT; antioxidant markers in PrEP users; Perler 2021 Methods and Results [27]; Herlitz 2010 full text [23]; transporter literature (OAT1, MRP4).

  • Special populations

    Pregnancy, renal impairment, children

    Renal impairment: see dosing thresholds above [2]. Pediatric label data include smaller BMD gain with TDF in trials 352 and 321 and median BMD gains of +2.58% (lumbar spine) in the ATN113 adolescent PrEP trial [1]. Pregnancy and lactation sections of the label were not retrieved.

Overlap map, to prevent double counting

Entries that rest on the same underlying source or mechanism. Do not count them as independent confirmation.

  • Phosphate, Potassium, Bicarbonate, Uric acid

    Shares evidence with: Hamzah [5], Ezinga [6], Park [15], Mathew [14]

    Note: One tubulopathy mechanism and the same cohorts. Four entries are four readouts of one injury, not four independent confirmations.

  • Phosphate, Vitamin D axis, Calcium and bone mineral

    Shares evidence with: Havens [7] and Truvada label sec 5.5 [1][2]

    Note: Havens supplies tubular phosphate reabsorption, PTH, 1,25-dihydroxyvitamin D, 25-hydroxyvitamin D and calcium. Phosphate wasting is the shared upstream mechanism for the PTH rise and osteomalacia.

  • Mitochondrial burden, Oxidative stress, ATP production

    Shares evidence with: Bowman [18]

    Note: The same in vitro experiments supply the maximal respiration, mitochondrial mass, ROS and ATP-linked respiration results. Mitochondrial burden also rests on [2], [16] and [17].

  • Mitochondrial burden, Phosphate, Potassium

    Shares evidence with: Herlitz [23] and the label tubulopathy statements [1][2]

    Note: The biopsy series [23] describes mitochondrial change in the same proximal tubular injury that underlies the renal wasting entries; do not count it as independent of the tubulopathy evidence.

  • Mitochondrial burden, Carnitine

    Shares evidence with: Label sec 12.4 polymerase gamma statement [2]

    Note: Carnitine is a class extrapolation resting on the same nucleoside analogue mitochondrial toxicity concept; Famularo [22] did not include this drug.

  • Vitamin D axis, Calcium and bone mineral

    Shares evidence with: Overton [24]

    Note: One randomized trial supplies both the 25-hydroxyvitamin D course on placebo and the BMD change; it is one source, not two.

  • Calcium and bone mineral, Phosphate

    Shares evidence with: Label sec 5.5 osteomalacia text [1][2]

    Note: Osteomalacia in the label is caused by the tubular phosphate loss graded under Phosphate.

  • Iron, Oxygen delivery/utilization

    Shares evidence with: Label hemoglobin rows [1][2]

    Note: The only retrieved data for both are the hemoglobin rows in the label PrEP and Study 934 laboratory tables. Hemoglobin is not an iron measure. Both stay separate entries.

  • Gut microbiome risk

    Shares evidence with: Dubé [19], Fulcher [20], Perler [27], review [21]

    Note: [21] is a mini-review of [19], [20] and Perler 2021 [27]; count the three as three small cohorts, not as the review adding independent data.

  • Copper

    Shares evidence with: None

    Note: No shared evidence: no source was found.

All references used above
  1. TRUVADA (emtricitabine and tenofovir disoproxil fumarate) tablet, film coated, Gilead Sciences, DailyMed label. — Regulatory label (Tier A). Revised 4/2024 (listing updated July 16, 2025). Sections 5.3, 5.5, 5.6, 6.1 and part of 12.3 read through a summarizing fetch tool, not the raw text; the last 8,984 characters were not read.Summarizer-read: quoted phrases are from the tool's output.
  2. Truvada prescribing information as reproduced on Drugs.com. — Regulatory label text (Tier A) read in two parts through a summarizing fetch tool: sections 5, 6, 7, 12.3 and 12.4 (polymerase gamma statements, quoted).Summarizer-read. The NIAID PDF copy of the April 2024 label was refused by the fetch tool (robots).
  3. DESCOVY (emtricitabine and tenofovir alafenamide) tablet, Gilead Sciences, DailyMed label. — Regulatory label (Tier A). Revised 7/2026. DISCOVER BMD and renal results, lactic acidosis, renal section. Last 9,450 characters not read; section 12.4 polymerase statement was cut off.Summarizer-read.
  4. WHO Collaborating Centre for Drug Statistics Methodology. ATC/DDD Index: J05AR03 tenofovir disoproxil and emtricitabine. — Reference index. J05AR17 (TAF combination) did not appear on the page read and is not asserted here.
  5. Hamzah L, et al. Treatment-limiting renal tubulopathy in patients treated with tenofovir disoproxil fumarate. J Infect 2017. — UK CHIC multicentre observational cohort; 15,983 on TDF-containing ART, 69 (0.4%) tubulopathy, 60 analysed. Accepted manuscript, DOI 10.1016/j.jinf.2017.01.010. Tier A for TDF; emtricitabine co-use not stated.Summarizer-read.
  6. Ezinga M, et al. Long-term treatment with tenofovir: prevalence of kidney tubular dysfunction and its association with tenofovir plasma concentration. Antivir Ther 2014;19:765-771. — Single-centre cross-sectional study, 161 analysed on TDF-containing ART for at least 1 year. No non-TDF comparator. Tier A for TDF.Summarizer-read.
  7. Havens PL, et al. Association of higher plasma vitamin D binding protein and lower free calcitriol levels with tenofovir disoproxil fumarate use and plasma and intracellular tenofovir pharmacokinetics: cause of a functional vitamin D deficiency? Antimicrob Agents Chemother 2013;57:5619-5628. PMID 24002093, DOI 10.1128/aac.01096-13. — Cross-sectional baseline analysis of ATN 063; 118 on TDF vs 85 not. Table 3 values read from the open eScholarship PDF; abstract also read in the PubMed record. Tier A for TDF.Summarizer-read tables.
  8. Labarga P, et al. Kidney tubular abnormalities in the absence of impaired glomerular function in HIV patients treated with tenofovir. AIDS 2009;23:689-696. — Cross-sectional, 284 patients. Abstract only, as reconstructed from an OpenAlex record (api.openalex.org/works/doi:10.1097/QAD.0B013E3283262A64). Tier A for TDF.Abstract only; reconstructed from an OpenAlex inverted index.
  9. Obiebi IP, Nwannadi EA. Tenofovir-induced renal tubular dysfunction among HIV patients on antiretroviral therapy in Nigeria. Kidney Res Clin Pract 2018;37:230-238. — Prospective cohort, 104 adults (57 TDF, 47 non-TDF), baseline, 16 and 24 weeks. Tier A for TDF.Summarizer-read; non-TDF drugs not named.
  10. Cooper RD, et al. Systematic review and meta-analysis: renal safety of tenofovir disoproxil fumarate in HIV-infected patients. Clin Infect Dis 2010;51:496-505. PMID 20673002, DOI 10.1086/655681. — 17 studies, 9 randomized. Abstract only, reconstructed from an OpenAlex record (api.openalex.org/works/pmid:20673002). Tier A counter-evidence; TDF versus non-TDF regimens.Abstract only; reconstructed.
  11. Mulligan K, et al. Effects of emtricitabine/tenofovir on bone mineral density in HIV-negative persons in a randomized, double-blind, placebo-controlled trial. Clin Infect Dis 2015. — iPrEx BMD substudy, 498 participants. Abstract read via the UCSF eScholarship record (PMC4565984 listed, not opened). Tier A, emtricitabine/TDF in cohort.Abstract only; summarizer-read. PMC full text not opened.
  12. Stellbrink H-J, et al. (ASSERT Study Group). Comparison of changes in bone density and turnover with abacavir-lamivudine versus tenofovir-emtricitabine in HIV-infected adults: 48-week results from the ASSERT study. Clin Infect Dis 2010;51:963-972. DOI 10.1086/656417. — Randomized open-label, 385 treatment-naive adults, both arms with efavirenz. Abstract only, reconstructed from OpenAlex. Active comparator, not non-use. Tier A, tenofovir-emtricitabine in cohort.Abstract only; reconstructed. PTH and vitamin D results not available in the text read.
  13. Sax PE, et al. Tenofovir alafenamide versus tenofovir disoproxil fumarate, coformulated with elvitegravir, cobicistat, and emtricitabine, for initial treatment of HIV-1 infection: two randomised, double-blind, phase 3, non-inferiority trials. Lancet 2015;385:2606-2615. PMID 25890673. — Two randomized trials, 1,733 treated. Abstract read from the PubMed record (summarizing fetch tool). Tier A for the emtricitabine/TDF arm (as part of a four-drug tablet).Abstract only; summarizer-read.
  14. Mathew G, Knaus SJ. Acquired Fanconi's syndrome associated with tenofovir therapy. J Gen Intern Med 2006;21:C3-C5. — Single case report (Tier B) with literature discussion. Tenofovir, lamivudine, efavirenz; emtricitabine not involved.Summarizer-read.
  15. Park J, et al. Tenofovir-induced Fanconi syndrome: a case report and literature review. Oxford Med Case Rep 2026;2:131-134. — Case report plus literature review of 95 published cases (Tier B). TDF; emtricitabine not mentioned. The summarizer flagged an internal unit inconsistency (mg/dL vs mmol/L for baseline phosphorus).Summarizer-read.
  16. Groener JB, et al. Short communication: decrease in mitochondrial transmembrane potential in peripheral blood mononuclear cells of HIV-uninfected subjects undergoing HIV postexposure prophylaxis. AIDS Res Hum Retroviruses 2011;27:969-972. PMID 21314473. — 18 uninfected adults on emtricitabine/tenofovir plus lopinavir/ritonavir for 4 weeks. Abstract read from the PubMed record. Tier A for the combination, confounded by ritonavir.Abstract only; summarizer-read.
  17. Bano M, et al. Mitochondrial toxicogenomics for antiretroviral management: HIV post-exposure prophylaxis in uninfected patients. Front Genet 2020;11:497. — Observational 28-day PEP study; 23 analysed (protease inhibitor plus tenofovir/emtricitabine n = 14; plus zidovudine/lamivudine n = 9). Page read through a summarizing fetch tool.Summarizer-read.
  18. Bowman ER, et al. In vitro exposure of leukocytes to HIV pre-exposure prophylaxis decreases mitochondrial function and alters gene expression profiles. Antimicrob Agents Chemother 2020. DOI 10.1128/AAC.01755-20. — In vitro and ex vivo human cell study (Tier B), emtricitabine and TDF tested separately at 1 micromol/L; paired human PrEP cohort for lipids and plasma markers. Accepted manuscript PDF read through a summarizing fetch tool.Summarizer-read.
  19. Dube MP, et al. Daily HIV pre-exposure prophylaxis (PrEP) with tenofovir disoproxil fumarate-emtricitabine reduced Streptococcus and increased Erysipelotrichaceae in rectal microbiota. Sci Rep 2018;8:15212. DOI 10.1038/s41598-018-33524-6. — Paired pre/post, 8 adherent men in CCTG 595. Tier A for the combination (tiny, no comparator). Article page read through a summarizing fetch tool.Summarizer-read.
  20. Fulcher JA, et al. Rectal microbiome alterations associated with oral human immunodeficiency virus pre-exposure prophylaxis. Open Forum Infect Dis 2019;6:ofz463. PMID 32258202, DOI 10.1093/ofid/ofz463. — Cross-sectional, 37 on PrEP vs 37 matched. Abstract only, reconstructed from OpenAlex. Tier A for the combination.Abstract only; reconstructed.
  21. Bragazzi NL, et al. HIV pre-exposure prophylaxis and its impact on the gut microbiome in men having sex with men. Front Microbiol 2022;13:922887. — Mini-review of three studies (Dube 2018, Fulcher 2019, Perler 2021). Narrative review, Tier C for any detail not in the primary studies; used to describe Perler 2021, which was not opened.Summarizer-read. Perler 2021 is now opened separately as [27].
  22. Famularo G, et al. Acetyl-carnitine deficiency in AIDS patients with neurotoxicity on treatment with antiretroviral nucleoside analogues. AIDS 1997;11:185-190. DOI 10.1097/00002030-199702000-00008. — Cross-sectional, 12 patients with neuropathy on didanosine, zalcitabine or stavudine plus controls. Tier C for this drug (not in cohort). Abstract reconstructed from OpenAlex; group sizes approximate.Excluded cohort: emtricitabine and tenofovir not studied. Abstract only; reconstructed.
  23. Herlitz LC, et al. Tenofovir nephrotoxicity: acute tubular necrosis with distinctive clinical, pathological, and mitochondrial abnormalities. Kidney Int 2010;78:1171-1177. PMID 20811330. — Retrospective biopsy series, 13 patients (Tier B). Abstract read from the PubMed record (PMID 20811330) through a summarizing fetch tool in the repair pass; used only as a supporting line under Mitochondrial burden.Abstract only, summarizer-read; the OpenAlex record has no abstract and the full text was not opened.
  24. Overton ET, et al. Vitamin D and calcium attenuate bone loss with antiretroviral therapy initiation: a randomized trial. Ann Intern Med 2015;162:815-824. PMID 26075752, DOI 10.7326/M14-1409. — ACTG A5280, double-blind placebo-controlled, 165 randomized (79 vs 86), efavirenz/emtricitabine/tenofovir disoproxil fumarate regimen. Abstract read through an OpenAlex single-record lookup (summarized); Tier A, emtricitabine/TDF in every participant, efavirenz not separable.Abstract only. PTH not in the abstract; the ACP journal page returned a client error and the PubMed record a bot challenge.
  25. Gallant JE, et al. Tenofovir DF, emtricitabine, and efavirenz vs. zidovudine, lamivudine, and efavirenz for HIV (Study 934). N Engl J Med 2006;354:251-260. PMID 16421366, DOI 10.1056/NEJMoa051871. — Open-label randomized trial, 517 treatment-naive adults. Abstract read through an OpenAlex single-record lookup (summarized); no hematology figure in the abstract. Tier A, emtricitabine plus TDF in the cohort; comparator is zidovudine/lamivudine.Abstract only; full text and hematology tables not opened (PubMed record served a bot challenge).
  26. Arribas JR, et al. Tenofovir disoproxil fumarate, emtricitabine, and efavirenz compared with zidovudine/lamivudine and efavirenz in treatment-naive patients: 144-week analysis. J Acquir Immune Defic Syndr 2008;47:74-78. DOI 10.1097/QAI.0b013e31815acab8. — 144-week follow-up of Study 934 (same cohort as [25], not an independent source). Abstract read through an OpenAlex single-record lookup (summarized); no renal discontinuations; no hematology figure in the abstract.Abstract only.
  27. Perler BK, et al. Evaluation of the microbiome in men taking pre-exposure prophylaxis for HIV prevention. AIDS Behav 2021;25:2005-2013. PMID 33394167, DOI 10.1007/s10461-020-03130-7. — Cross-sectional rectal swab 16S study, 27 men (14 on PrEP). Abstract page opened on Springer through a summarizing fetch tool; Methods and Results paywalled. Regimen not confirmed (tenofovir-based; keywords list TDF/FTC and TAF/FTC).Abstract only; regimen unconfirmed, so supportive context only. The OpenAlex record has no abstract.
  28. Nucleotide analogue-related proximal renal tubular dysfunction during long-term treatment of chronic hepatitis B: a cross-sectional study. Gastroenterol Res Pract 2016. PMID 27872640, DOI 10.1155/2016/2952635. — 92 chronic hepatitis B patients on adefovir or tenofovir, alone or added to lamivudine; potassium excretion calculated, potassium loss with hypokalemia one of six tubular criteria. Abstract reconstructed from OpenAlex.Pooled adefovir and tenofovir cohort without emtricitabine; no per-drug potassium counts in the abstract; full text not opened (Hindawi, DOI and Wiley routes failed). Not used as a graded source.
  29. Tenofovir-induced distal renal tubular acidosis: a rare cause of recurrent hypokalaemic paralysis. J R Coll Physicians Edinb 2022. PMID 36146985. — Case report (Tier B). Seen only as a PubMed listing snippet.Not opened beyond the listing snippet.